BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012D11LP1|AL426365
(811 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig141 841 0.0
3x_Contig1376 382 e-106
3x_Contig1591 207 4e-53
>3x_Contig141
Length = 808
Score = 841 bits (423), Expect = 0.0
Identities = 426/429 (99%)
Strand = Plus / Minus
Query: 1 ccaaaaacaccaagatgtggaagacgtagttgaagtccaaaactacggtgacgatactag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ccaaaaacaccaagatgtggaagacgtagttgaagtccaaaactacggtgacgatactag 370
Query: 61 cgtgtcttacaaggatggcctcacagaaagtgacgaagaagggcatcagattaaatacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 cgtgtcttacaaggatggcctcacagaaagtgacgaagaagggcatcagattaaatacaa 310
Query: 121 gacttgttcatggcagcatactacaggattattgctatcagaatacatcgtcctagccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gacttgttcatggcagcatactacaggattattgctatcagaatacatcgtcctagccat 250
Query: 181 catgtcatttccatggtcttattcggtgttgggtttaattccgggacttatattgactgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 catgtcatttccatggtcttattcggtgttgggtttaattccgggacttatattgactgc 190
Query: 241 atttgttgcmattaccgtcttgtacacaggacttattgttttggattattgtgaacggtt 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 atttgttgcaattaccgtcttgtacacaggacttattgttttggattattgtgaacggtt 130
Query: 301 ccctcatcttaaaaatgtgtgtgacattggacaacatctattctggggcagcmaggctgc 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 129 ccctcatcttaaaaatgtgtgtgacattggacaacatctattctggggcagcaaggctgc 70
Query: 361 ctggtatgcmactgctgtttgcttcatagctaacaacacacttatccaagggttgcacgt 420
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 ctggtatgcaactgctgtttgcttcatagctaacaacacacttatccaagggttgcacgt 10
Query: 421 cttggtcgg 429
|||||||||
Sbjct: 9 cttggtcgg 1
>3x_Contig1376
Length = 7449
Score = 382 bits (192), Expect = e-106
Identities = 192/192 (100%)
Strand = Plus / Minus
Query: 620 cacccagctggctatgatggtactgctgtaacgtatcaattatggcctaagaagggaaca 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7449 cacccagctggctatgatggtactgctgtaacgtatcaattatggcctaagaagggaaca 7390
Query: 680 acatatgttgatgccatgggtgcatttttgaatattgtctacacttttgttggtcaaatt 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7389 acatatgttgatgccatgggtgcatttttgaatattgtctacacttttgttggtcaaatt 7330
Query: 740 acttatccacagttcatctctgagatgaaaagaccaagggaattcaagaaggtactttgg 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7329 acttatccacagttcatctctgagatgaaaagaccaagggaattcaagaaggtactttgg 7270
Query: 800 atagtcactgcg 811
||||||||||||
Sbjct: 7269 atagtcactgcg 7258
>3x_Contig1591
Length = 14045
Score = 207 bits (104), Expect = 4e-53
Identities = 250/296 (84%), Gaps = 2/296 (0%)
Strand = Plus / Minus
Query: 498 tcatttcatttgtgttttcaatcccaagaacattctcctccttatctaaagttgcatact 557
||||||| ||||||||||| ||||||||||| ||| |||| | ||||||||||||||||
Sbjct: 4591 tcatttcttttgtgttttctatcccaagaaccttcgcctctatgtctaaagttgcatact 4532
Query: 558 tctcagctattaccatgttcatttcagttatcttggctatgatctttgctggaattcagg 617
||||||||||||||||||||||||| || || ||||||| ||||||| ||||| ||||
Sbjct: 4531 tctcagctattaccatgttcatttcggtaatactggctatcatctttgtaggaatccagg 4472
Query: 618 atcacccagctggctatgatggtactgctgtaacgtatca-attatggcctaagaaggga 676
||||||| | ||| |||||||||||| | | || | ||| |||||||| |||||||
Sbjct: 4471 atcacccggttggttatgatggtactcatttgacat-tcagtttatggccacagaagggc 4413
Query: 677 acaacatatgttgatgccatgggtgcatttttgaatattgtctacacttttgttggtcaa 736
|||| ||||| ||||| ||||||||||||||||| ||||| ||| ||| | || ||||
Sbjct: 4412 acaagttatgtagatgcaatgggtgcatttttgaacattgtgtacgttttcgctgctcaa 4353
Query: 737 attacttatccacagttcatctctgagatgaaaagaccaagggaattcaagaaggt 792
| |||||||||||||||||||| || ||||||||||| ||||| |||||||||||
Sbjct: 4352 gtcacttatccacagttcatctcagaaatgaaaagaccgagggatttcaagaaggt 4297
Score = 133 bits (67), Expect = 5e-31
Identities = 127/147 (86%)
Strand = Plus / Minus
Query: 85 agaaagtgacgaagaagggcatcagattaaatacaagacttgttcatggcagcatactac 144
|||||| || |||||||| ||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 5004 agaaagcgatgaagaaggtcatcagattaaatacaagactagttcatggcagcatattac 4945
Query: 145 aggattattgctatcagaatacatcgtcctagccatcatgtcatttccatggtcttattc 204
||| || || |||||||||||||| || ||||||| ||||| || |||||||| |||||
Sbjct: 4944 aggtctaatgttatcagaatacatcatcttagccatgatgtctttcccatggtcctattc 4885
Query: 205 ggtgttgggtttaattccgggacttat 231
|| || |||||||| ||||| |||||
Sbjct: 4884 agtattaggtttaataccgggtcttat 4858
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5264
Number of Sequences: 1807
Number of extensions: 5264
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 3
length of query: 811
length of database: 10,358,551
effective HSP length: 16
effective length of query: 795
effective length of database: 10,329,639
effective search space: 8212063005
effective search space used: 8212063005
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)